Perform parameterized gene set enrichment analysis (GSEA) on multiple differential expression contrasts.

acidgsea currently extends the functionality of fgsea.

Installation

R method

if (!requireNamespace("BiocManager", quietly = TRUE)) {
    install.packages("BiocManager")
}
install.packages(
    pkgs = "acidgsea",
    repos = c(
        "r.acidgenomics.com",
        BiocManager::repositories()
    )
)